CNL Publication Search: Kennedy, M.

CNL Publication Index: BibTeX

This database contains all the publications of Terrence J. Sejnowski starting in 1969.

Most of these publications can be downloaded in PDF format. They are made available for individual use only; contact the publisher and the author to receive permission for reproduction in any form.

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Found 6 Articles
Found 6 Abstracts
Found 12 Total.

Articles

Husar, A., Ordyan, M., Garcia, G. C., Yancey, J. G., Saglam, A. S., Faeder, J. R., Bartol, T. M., Kennedy, M. B., Sejnowski, T. J. MCell4 with BioNetGen: A Monte Carlo Simulator of Rule-Based Reaction-Diffusion Systems with Python Interface, PLOS Computational Biology, 20, e1011800, 2024 (PDF)
Ordyan, M., Bartol, T., Kennedy, M., Rangamani, P., Sejnowski, T. J. Predicting the fMRI signal fluctuation with recurrent neural networks trained on vascular network dynamics, PLOS Computational Biology, 16(7):e1008015, 2020 (PDF)
Ordyan, M . Bartol, T. M. Jr. Kennedy, M. B. Rangamani, P. Sejnowski, T. J. Interactions between calmodulin and neurogranin govern the dynamics of CaMKII as a leaky integrator, PLOS Computational Biology, 16(7):e1008015, 2020 (PDF)
Pharris, M.C., Patel, N.M., VanDyk, T.G., Bartol, T.M., Sejnowski, T.J., Kennedy, M.B., Stefan, M.I., Kinzer-Ursem, T.L. A Multi-State Model of the CaMKII Dodecamer Suggests a Role for Calmodulin in Maintenance of Autophosphorylation, PLoS Comput Biol., 23, 15(12):e1006941, 2019 (PDF)
Bartol, T. M. Jr. Keller, D.X. Kinney, J.P. Bajaj, C. Harris, K.M. Sejnowski, T. J. Kennedy, M.B. Computational reconstitution of spine calcium transients from individual proteins, Frontiers in Synaptic Neuroscience, 7:17. doi: 10.3389/fnsyn.2015.00017, 2015 PMCID:PMC4595661 (PDF)
Stefan, M. Bartol, T. Sejnowski, T. J. Kennedy, M. Multi-state Modeling of Biomolecules, PLOS Computational Biology, 10 (9) e1003844, 2014 PMCID:PMC4201162 (PDF)

Abstracts

Ordyan, M. Bartol, T. M. Jr. Kennedy, M. B. Rangamani, P. Sejnowski, T. J. Interactions between CaM and Ng govern the dynamics of CaMKII as a leaky integrator, Society for Neuroscience Abstracts, 2019
Sameni, S. Bartol, T. M. Jr. Kennedy, M. B. Sejnowski, T. J. Quantitative MCell model shows competition and dynamic equilibrium within PDZ domain of PSD-95 at the postsynaptic density, Society for Neuroscience Abstracts, 2019
Stefan, M. Pepke, S. Mihalas, S. Bartol, T. Sejnowski, T. J. Kennedy, M. Multi-Stage Modeling of the Kinetics of Activation of CaMKII, Frontiers Events, 4th INCF Congress of Neuroinformatics, Boston, USA, 4 Sep - 6 Sep, 2011, 2011 (PDF)
Nadkarni, S., Bartol, T., Kennedy, M. E., Harris, K., Stevens, C., Levine, H., Sejnowski, T. J. Effects of presynaptic calcium stores on short-term synaptic plasticity, Society for Neuroscience Abstracts, 2011
Kerr, R. A. Bartol, T. M. Jr. Stiles, J. R. Shutenko, T. Kennedy, M. B. Sejnowski, T. J. Mcell3: a Next-Generation Simulator of Cellular Microphysiology, Society for Neuroscience Abstracts, 30, 2004 (PDF)
Franks, K. M. Weinberg, R. J. Lucic, V. Kennedy, M. B. Bartol, T. M. Jr. Sejnowski, T. J. Anatomical and Functional Microdomains of Calcium and Calcium-Dependent Proteins in Dendritic Spines, Society for Neuroscience Abstracts, 27, 2001 (PDF)